Figure 3

SNPs in PAM . (A) Schematic of the PAM gene with loci of SNPs examined in this study. (B,C) Haploview LD plot for eight PAM gene SNPs with haplotype blocks identified using the four-gamete rule[26]. Darkened blocks indicate SNP pairs without evidence of extensive recombination (i.e. 4-gamete having a frequency < 0.01). (B) LD plot showing D’ - Values shown represent 100 × |D’|, empty boxes represent value of 100 (i.e. |D’| = 1). (C) Haploview LD plot showing R² correlation values.