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Table 5 Topology table for up and down regulated genes

From: Identification of hub genes related to the progression of type 1 diabetes by computational analysis

Regulation

Node

Degree

Betweenness

Stress

Closeness

Up

EGFR

1343

0.514227

4.35E+08

0.441893

Up

GRIN2B

195

0.008701

14,535,992

0.282164

Up

GJA1

170

0.03151

64,939,702

0.31364

Up

CAP2

108

0.004218

888,128

0.325945

Up

MIF

99

0.025028

7,627,912

0.362124

Up

DCC

98

0.009465

15,166,420

0.286956

Up

PRL

89

0.001208

656,482

0.239894

Up

EYA1

72

0.003864

4,335,792

0.271944

Up

RGS4

63

0.003414

1,243,420

0.31129

Up

GRIA4

55

0.001352

431,502

0.292547

Up

CCL19

50

0.001236

1,457,894

0.1951

Up

DKK1

50

0.003569

4,044,234

0.25252

Up

PLN

43

0.003324

524,170

0.286083

Up

GPR37

41

0.021208

9,337,328

0.303261

Up

LRP2

39

0.023544

9,018,868

0.307583

Up

PTHLH

38

0.001269

1,103,574

0.257729

Up

PPFIA2

33

0.002618

3,942,042

0.269956

Up

KIF1A

31

0.011317

2,986,868

0.345485

Up

HOXB7

31

0.002165

2,106,446

0.268893

Up

MYOT

28

0.003103

475,758

0.275841

Up

OTX2

28

0.003016

868,076

0.271263

Up

NPPC

27

0.003211

986,326

0.247419

Up

KRT20

26

0.005296

5,544,830

0.279444

Up

MRPL12

25

0.050618

70,486,194

0.310399

Up

NPBWR1

23

4.01E-04

207,170

0.174777

Up

TRHR

22

4.10E-04

210,106

0.238152

Up

CCL13

20

0.003552

1,650,164

0.263645

Up

MFAP2

19

0.002005

451,990

0.228053

Up

TRIM55

18

0.021705

17,474,648

0.300609

Up

NEUROG3

18

0.011467

9,544,416

0.269256

Up

NRAP

18

0.001974

406,892

0.285085

Up

PTPRT

18

0.00104

208,946

0.324523

Up

OSR1

17

4.56E-04

195,068

0.226447

Up

EFS

17

0.003557

2,975,070

0.285232

Up

HBZ

17

0.006623

4,433,868

0.287818

Up

KCNK4

16

4.01E-04

117,736

0.247125

Up

AVP

16

0.006488

3,769,102

0.26391

Up

SOX18

16

8.04E-04

761,526

0.244028

Up

NACA2

15

0.002639

3,304,692

0.274822

Up

SRXN1

15

0.005715

9,265,020

0.276852

Up

UTF1

13

1

12

1

Up

RNF180

13

4.01E-04

186,722

0.235697

Up

KRT38

12

0.011531

15,515,646

0.273676

Up

FAP

12

0.005985

10,442,836

0.259379

Up

GULP1

12

0.001542

1,584,446

0.281416

Up

IL17B

12

4.02E-04

151,558

0.24843

Up

CRHR2

11

0.002005

1,044,220

0.245978

Up

RFPL4A

10

9.09E-06

2638

0.1894

Up

SNAP91

10

0.001514

2,227,728

0.265994

Up

ADGRL4

10

0

0

0

Up

FBXO10

10

0.002727

598,280

0.287801

Up

CST6

9

0.009382

6,670,420

0.28234

Up

PADI3

9

0.003682

1,684,994

0.267321

Up

LIPF

9

0.002462

1,222,458

0.239008

Up

CA10

8

0.00882

3,036,648

0.251628

Up

EPB41L4B

8

0.00328

3,044,266

0.280229

Up

OR51E2

8

0.002481

1,735,460

0.249674

Up

RIMS4

8

4.46E-04

187,102

0.255497

Up

MYT1L

8

1.71E-04

156,968

0.255523

Up

C4orf48

7

4.02E-04

410,864

0.238654

Up

EMILIN3

7

0.002789

890,368

0.2335

Up

CSNK1A1L

6

0.002373

3,707,900

0.264526

Up

ATP1A4

6

0.001778

1,343,858

0.269795

Up

OR6C70

6

0

0

1

Up

MEIOB

6

1.19E-04

55,294

0.237857

Up

UPK1B

5

0.001266

639,316

0.238883

Up

TEX15

5

8.47E-04

384,696

0.261104

Up

CAMK1G

5

0.001061

955,066

0.263353

Up

FOXQ1

5

0.02441

34,422,300

0.29497

Up

MYH13

4

0.007248

6,307,480

0.276193

Up

MYH6

4

0.006387

8,432,142

0.276223

Up

SPATA22

4

0.001497

616,922

0.255628

Up

TRHDE

4

0.004478

568,880

0.325562

Up

CCDC144A

4

0.001246

906,138

0.212789

Up

PCDHB10

4

8.03E-04

313,938

0.212698

Up

CNMD

4

0.001108

411,030

0.251134

Up

ABRA

4

0.001639

940,076

0.263019

Up

MS4A5

4

0

0

0.246088

Up

DNAH3

3

5.51E-04

333,004

0.269839

Up

MTRNR2L1

3

9.66E-04

646,606

0.269168

Up

KPNA7

3

4.63E-04

356,676

0.259541

Up

CBLN2

3

0

0

1

Up

FSIP2

3

4.14E-04

158,112

0.250276

Up

SPATA16

3

0

0

0.237426

Up

ZNF214

2

0.004409

2,022,086

0.235753

Up

CCDC140

2

4.01E-04

96,422

0.215353

Up

UGT2A3

2

8.95E-04

518,942

0.239952

Up

FAM71D

2

4.04E-04

236,600

0.24016

Up

GOLGA6B

2

0

0

0.221585

Up

C2orf73

2

8.02E-04

393,150

0.236301

Up

GOLGA8G

2

0

0

1

Up

SMCO1

1

4.28E-04

175,370

0.225341

Up

ANKRD30B

1

0

0

1

Up

FCAMR

1

0

0

0.225719

Up

HFM1

1

8.96E-05

46,366

0.226673

Up

BTBD18

1

0

0

0.306486

Up

ACSBG2

1

4.02E-04

116,692

0.247358

Up

KRT39

1

0

0

0.251806

Up

G6PC

1

0.001203

289,260

0.215428

Up

RBM46

1

1.99E-06

1374

0.252879

Up

PCDHB2

1

0

0

1

Up

AS3MT

1

0

0

0.210364

Up

RAD21L1

1

0

0

1

Up

CAPN9

1

2.61E-06

2714

0.211893

Up

FABP6

1

0

0

1

Down

POLR2A

512

0.095104

2E+08

0.3738

Down

PRKACA

350

0.104658

44,280,174

0.378052

Down

GABARAP

322

0.144708

36,234,824

0.358401

Down

TLN1

223

0.027406

67,578,124

0.35998

Down

PXN

173

0.029203

29,047,866

0.360318

Down

HIP1

146

0.007469

12,022,620

0.347944

Down

GAB2

118

0.014217

38,718,180

0.340041

Down

SYVN1

114

0.025941

12,050,404

0.307887

Down

KCNIP2

110

0.002849

14,186,360

0.253084

Down

ARHGAP1

106

0.011263

27,047,958

0.348406

Down

NECTIN1

102

0.003189

17,978,038

0.252469

Down

RGL2

88

0.003069

3,605,218

0.263534

Down

ASF1B

85

0.00926

21,237,598

0.2861

Down

IGF2R

78

0.010589

26,691,414

0.303021

Down

SLC9A1

75

0.009561

24,396,634

0.292461

Down

VPS37C

75

0.006908

5,646,832

0.29327

Down

MEFV

72

0.001361

31,003,730

0.301081

Down

CDKN2A

72

0.051693

14,128,370

0.321613

Down

MAP1A

63

0.008662

3,403,950

0.291879

Down

ARF3

60

0.004127

11,523,596

0.287784

Down

CIITA

59

0.006319

10,301,788

0.302892

Down

WDTC1

57

0.005909

19,161,622

0.278569

Down

MICALL1

53

0.005986

7,902,576

0.285919

Down

ITGAX

53

0.001212

13,088,030

0.238757

Down

SORBS3

51

0.016308

10,468,808

0.314749

Down

DSP

47

0.039735

2,314,856

0.347581

Down

BAZ2A

45

0.004013

13,101,300

0.289472

Down

MAPRE3

44

0.006813

4,554,084

0.28533

Down

CRTC2

44

0.004812

11,994,716

0.296709

Down

PADI4

43

0.002174

7,728,076

0.275765

Down

SPINT1

42

0.001717

6,257,478

0.263492

Down

ARHGEF5

40

0.003561

7,025,544

0.336483

Down

LASP1

40

0.021943

9,410,452

0.31303

Down

PDZD3

39

0.005273

6,150,510

0.249549

Down

HIVEP3

39

0.001859

4,355,942

0.26672

Down

TNFRSF21

36

0.001781

3,131,524

0.274883

Down

SOGA1

36

0.005248

10,217,032

0.291623

Down

MBD6

34

0.002017

1,737,436

0.231979

Down

ATP6V0D1

33

0.026324

1,957,202

0.303649

Down

IQCN

32

0.015047

5,650,026

0.283239

Down

IL17RA

30

0.020601

4,651,714

0.286807

Down

ABTB2

29

0.001793

4,772,698

0.279695

Down

INCA1

29

0.011463

2,924,018

0.276668

Down

MAST3

28

0.019115

4,567,048

0.308592

Down

BEST1

28

4.42E-04

3,684,990

0.260082

Down

PRSS21

28

0.001117

5,817,460

0.25749

Down

TPCN2

27

0.014228

4,144,602

0.284792

Down

LAG3

26

4.41E-06

6,746,636

0.238038

Down

GMIP

24

8.12E-04

3,636,310

0.263896

Down

CLEC4C

24

4.01E-04

725,910

0.175956

Down

TAGLN

23

0.016019

4,532,938

0.283771

Down

FAM219A

20

0.008105

916,962

0.287867

Down

NCR1

20

0.002234

349,872

0.271381

Down

PRRC2A

18

0.015874

2,767,592

0.307261

Down

KCNMB1

18

8.42E-04

2,984,594

0.257118

Down

EIF3CL

17

0.003808

1,129,844

0.284272

Down

H6PD

17

5.55E-04

3,133,402

0.259123

Down

MMP25

17

4.01E-04

2,598,252

0.238837

Down

ENTPD2

16

1

2,170,770

1

Down

DYSF

16

0.009592

704,606

0.292839

Down

LGALS9

16

0.01981

1,417,206

0.288134

Down

DPEP2

16

0.007617

1,500,838

0.260885

Down

POMZP3

14

8.35E-05

836,800

0.254857

Down

EXTL3

13

0.004948

611,924

0.27899

Down

EPHX1

13

0.006221

2,003,020

0.279491

Down

C15orf39

12

0.00794

610,110

0.291793

Down

PLXNA2

12

0.009415

1,162,970

0.277268

Down

PLPPR2

12

0.006567

1,448,934

0.253961

Down

MYADM

11

0.007222

952,256

0.283771

Down

GTPBP1

11

0.005922

1,877,862

0.299976

Down

ADGRE5

10

0.014659

888,184

0.289203

Down

SULT1A2

10

0.00172

1,783,464

0.247973

Down

INKA2

10

0.00214

1,184,052

0.279616

Down

NDST1

10

0.001942

1,716,840

0.257383

Down

TTLL3

9

0.002348

134,132

0.261694

Down

DRICH1

9

0.002408

1,799,342

0.237302

Down

APOL2

9

0.007736

489,254

0.289489

Down

ZNF70

9

0.001286

3,985,632

0.223763

Down

ASPRV1

9

0.00395

1,038,668

0.290552

Down

PLXNA4

8

0.001243

473,354

0.262534

Down

FAM160A1

8

4.10E-04

882,848

0.241043

Down

PLBD2

8

0.002764

1,265,098

0.278057

Down

RNF122

8

0.001044

1,049,362

0.265329

Down

PAQR6

8

4.10E-04

868,456

0.23693

Down

CHKB

7

0

602,254

0.217363

Down

CRISPLD2

7

3.80E-06

943,864

0.256153

Down

DUSP18

7

0.002971

325,170

0.315506

Down

TRANK1

7

4.02E-04

801,248

0.245821

Down

TP53INP2

6

1.70E-07

703,508

0.247198

Down

ARAP3

6

4.92E-04

286,916

0.268169

Down

TNFAIP2

6

0.001439

633,692

0.254324

Down

APOL1

5

6.25E-04

48,364

0.233895

Down

PRR16

5

0.001298

158,878

0.26692

Down

ITIH4

5

4.46E-04

356,728

0.266806

Down

SIGLEC14

5

0

273,222

1

Down

C5AR2

5

0.019084

54,700

0.270983

Down

DTX4

5

8.06E-04

445,430

0.256483

Down

SCAMP5

5

0.002526

469,900

0.229016

Down

SH3D21

5

1.03E-04

675,458

0.314928

Down

LY6G5B

4

6.87E-04

43,440

0.259947

Down

TMEM121B

4

0

217,638

0.1804

Down

AOC3

4

0.002207

251,106

0.268748

Down

DAAM2

3

0.00264

78,488

0.259838

Down

ZBTB3

3

0.006264

225,562

0.267838

Down

LCNL1

3

9.23E-05

198,214

0.235286

Down

RIMS3

2

4.16E-04

11,332

0.223944

Down

ZNF385A

2

6.60E-04

3498

0.264948

Down

RIPOR1

2

6.43E-04

1512

0.277964

Down

KDM6B

2

0.003441

321,702

0.271411

Down

PAPLN

2

0.001857

53,928

0.244759

Down

RAB36

2

4.01E-04

4276

0.188797

Down

NOMO2

2

5.94E-04

78

0.280182

Down

AOC2

2

5.51E-04

3886

0.250113

Down

PROSER3

2

4.60E-05

2

0.23941

Down

WDFY4

2

2.38E-06

184,474

0.236975

Down

ATG16L2

2

0.001016

322,434

0.299651

Down

RAPGEFL1

2

7.68E-05

9928

0.260599

Down

CPNE9

1

9.19E-05

0

0.23639

Down

RSKR

1

4.69E-06

0

0.247739

Down

RGL3

1

0

0

0.234621

Down

SHISA4

1

0

0

1

Down

TMEM63C

1

0

0

0.24945

Down

NPIPB3

1

8.84E-06

0

0.229639

Down

CLEC17A

1

0

0

0.209331

Down

TIFAB

1

0

0

1

Down

OSCAR

1

0

0

1

Down

AGAP9

1

0

0

0.236256