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Table 4 The enriched GO terms of the up and down regulated differentially expressed genes

From: Identification of hub genes related to the progression of type 1 diabetes by computational analysis

GO ID

CATEGORY

GO Name

P Value

FDR B&H

FDR B&Y

Bonferroni

Gene Count

Gene

Up regulated genes

 GO:0007267

BP

cell-cell signaling

6.48E-03

1.84E-01

1.00E+00

1.00E+00

22

TRHDE,NPBWR1,MYH6,AVP,PPFIA2,IL17B,PCDHB10,PCDHB2,GRIA4,GRIN2B,DCC,RGS4,PTHLH,CRHR2,GJA1,CSNK1A1L,DKK1,EGFR,SNAP91,RIMS4,LRP2,CCL13

 GO:0022414

BP

reproductive process

1.22E-02

1.99E-01

1.00E+00

1.00E+00

19

NPPC,AVP,BTBD18,MEIOB,RAD21L1,TEX15,PTHLH,GJA1,EGFR,SPATA16,MIF,OSR1,LRP2,HFM1,ACSBG2,SPATA22,ATP1A4,PRL,UTF1

 GO:0005887

CC

integral component of plasma membrane

1.14E-03

1.17E-01

7.35E-01

3.43E-01

22

TRHDE,SEMA6B,RDH8,NPBWR1,TMC2,TRHR,GPR37,PCDHB10,PCDHB2,TM4SF5,GRIA4,GRIN2B,DCC,KCNK4,PTPRT,CRHR2,ADGRL4,GJA1,EGFR,LRFN5,UPK1B,ATP1A4

 GO:0099512

CC

supramolecularfiber

1.65E-02

1.84E-01

1.00E+00

1.00E+00

17

ABRA,DNAH3,MYH6,MYOT,NRAP,TMC2,MYH13,KIF1A,GRIN2B,GJA1,KRT39,MFAP2,TRIM55,LRP2,KRT20,KRT38,PTPN20

 GO:0038023

MF

signaling receptor activity

1.59E-03

1.30E-01

8.79E-01

7.75E-01

22

OR2T29,NPBWR1,MYOT,TRHR,GPR37,OR10J3,GRIA4,GRIN2B,DCC,PTPRT,CRHR2,ADGRL4,MTRNR2L1,OR51E2,MTRNR2L6,OR51E1,DKK1,EGFR,OR6C70,LRP2,ADGRF4,FCAMR

 GO:0005198

MF

structural molecule activity

3.67E-02

2.51E-01

1.00E+00

1.00E+00

10

MYOT,EPB41L4B,MRPL12,PPFIA2,EMILIN3,KRT39,MFAP2,UPK1B,KRT20,KRT38

Down regulated genes

 GO:0006906

BP

vesicle fusion

1.55E-04

7.94E-02

6.71E-01

4.06E-01

17

CRISPLD2,DSP,RIMS3,OSCAR,SIGLEC14,DYSF,ITGAX,ITIH4,GAB2,LGALS9,MMP25,IGF2R,SCAMP5,TLN1,ADGRE5,TNFAIP2,CLEC4C

 GO:0022610

BP

biological adhesion

2.52E-03

2.18E-01

1.00E+00

1.00E+00

19

CDKN2A,MYADM,DSP,HLA-DQA1,LAG3,SIGLEC14,DYSF,ITGAX,TNFRSF21,LGALS9,SLC9A1,TLN1,NECTIN1,SORBS3,AOC3,PLXNA4,PXN,ADGRE5,PLXNA2

 GO:0098805

CC

whole membrane

4.42E-03

1.66E-01

1.00E+00

1.00E+00

21

VPS37C,MYADM,HIP1,TPCN2,DSP,HLA-DQA1,SIGLEC14,GABARAP,DYSF,ITGAX,MICALL1,MMP25,ARHGAP1,SLC9A1,IGF2R,ATP6V0D1,SCAMP5,PRKACA,ADGRE5,CLEC4C,ATG16L2

 GO:0030054

CC

cell junction

2.83E-02

3.05E-01

1.00E+00

1.00E+00

15

MYADM,DSP,ARHGEF5,RIMS3,LASP1,SLC9A1,IGF2R,SCAMP5,TLN1,NECTIN1,SORBS3,PXN,ADGRE5,ALKBH6,PDZD3

 GO:0008289

MF

lipid binding

2.91E-03

1.08E-01

7.31E-01

1.00E+00

13

HIP1,CPNE9,ARHGEF5,PAQR6,APOL1,DYSF,GAB2,MICALL1,SLC9A1,IGF2R,ARAP3,TLN1,APOL2

 GO:0051020

MF

GTPase binding

5.51E-03

1.08E-01

7.31E-01

1.00E+00

10

ARHGEF5,RGL3,RIMS3,MICALL1,ARHGAP1,PRKACA,DAAM2,RIPOR1,RGL2,RAPGEFL1

  1. BP Biological Process, CC Cellular Component and MF Molecular Functions