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Table 3 Genotype analysis of HNF1A gene SNPs

From: HNF1A gene p.I27L is associated with early-onset, maturity-onset diabetes of the young-like diabetes in Turkey

 

Controls, n

Diabetes, n

OR (95% CI)

P

I27L rs1169288 (%)

 *Co-dominant Wild type GG

105

146

  

 Heterozygous GT

120

233

1.02 (0.57–1.78)

0.984

 Homozygous TT

38

110

1.71 (1.25–3.46)

0.024

 Dominant (GT + TT/GG)

158 vs 105

343 vs 146

1.68 (1. 21-2.13)

0.035

 Recessive (TT/GT + GG)

38 vs 225

110 vs 379

1.56 (1. 14-2.57)

0.048

S487 N rs2464196 (%)

 *Co-dominant Wild type CC

102

188

  

 Heterozygous CT

121

210

0.58 (0.35–1.39)

0.471

 Homozygous TT

40

91

1.25 (0.57–2.75)

0.638

 Dominant (CT + TT/CC)

161 vs 102

301 vs 188

1.01 (0.74–1.38)

0.938

 Recessive (TT/CT + CC)

40 vs 223

91 vs 398

1.27 (0.84–1.91)

0.241

A98V rs1800574 (%)

 *Co-dominant Wild type CC

208

411

  

 Heterozygous CT

52

64

1.26 (0.48–3.29)

0.676

 Homozygous TT

3

14

1.35 (0.95–3.54)

0.027

 Dominant model (CT + TT/CC)

55 vs 208

78 vs 411

0.71 (0.48–1.05)

0.089

 Recessive model (TT/CT + CC)

3 vs 260

14 vs 475

2.55 (0.72–8.97)

0.130

  1. *Co-dominat model was compared wild type, homozygous variant and heterozygous variant were compared
  2. DM Diabetes mellitus, OR odds ratio, CI confidence interval
  3. Data are shown as mean ± standard deviation (means ± SD) and percentage (%)
  4. Bold represents the significant p-values
  5. Categorical variables were analyzed with Chi-square test or Fisher’s exact test, where appropriate
  6. Multiple logistic regression analysis and Fisher’s exact test were tested using models: dominant (major allele homozygotes vs heterozygotes + minor allele homozygotes), recessive (major allele homozygotes + heterozygotes vs minor allele homozygotes) and codominant (major allele homozygotes vs heterozygote and minor allele homozygotes vs major allele homozygotes)